PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01026g12002.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 228aa    MW: 25593.4 Da    PI: 4.6553
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01026g12002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.94.8e-10133176755
                               HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               + ErrRR r+++++  Lr+l+P+      +K++Ka+i   A+ Y+  Lq
  Peinf101Scf01026g12002.1 133 ISERRRRGRMKEKLYALRSLVPNI-----TKMDKASIIGDAILYVEGLQ 176
                               67*********************7.....7***************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474599.95E-16124190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.621126175IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.7E-16128193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.18E-11128178No hitNo description
SMARTSM003539.5E-13132181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-7133176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MESTNVNDVG LINFIDEANF EQFIELIRGE NADPIVKFCP NYDCEHIAGC FDPHMADYAT  60
FEPTPTDWNI ATNMSCDPIS VYANSLPGEI KLSGDHDDDE EEEEDNDDEG SSGTTTTTTT  120
KRSKRTDRSR TLISERRRRG RMKEKLYALR SLVPNITKMD KASIIGDAIL YVEGLQTQAK  180
RLKAEIADLE SSLKGTNNNQ GGAFQNSKKF NFTSHYPAIK RITTVCFT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF4378781e-50AF437878.1 Lycopersicon esculentum bHLH transcriptional regulator (fer) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016454412.11e-92PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like
TrEMBLA0A1S3YQT82e-91A0A1S3YQT8_TOBAC; transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like
STRINGXP_009793167.18e-92(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37822340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.11e-26FER-like regulator of iron uptake