PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01033g03005.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 212aa    MW: 23960.9 Da    PI: 4.3252
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01033g03005.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.49e-105292248
                              T-HHHHHHHHTTTS-HHHHHHHHHHHT CS
           Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqkyl 48
                              + W++Ia++++ gRt++++k++w+++l
  Peinf101Scf01033g03005.1  5 R-WSRIAAHLP-GRTDNEIKNFWNTHL 29
                              4.*********.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.403133IPR017930Myb domain
SuperFamilySSF466896.94E-9437IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.4E-13430IPR009057Homeodomain-like
PfamPF002497.4E-8529IPR001005SANT/Myb domain
CDDcd001675.70E-8529No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MSQTRWSRIA AHLPGRTDNE IKNFWNTHLK KKLLKAGIDP VTHQPINDPR LLLSLSNLIN  60
PLESVLRLQA EVTEMAKIHL IQNIIQVLTP PLIPNLQENN FPMQQLYNLA LYENIVTNVT  120
NIDEPSPISN SSDMLLNPSV VENNITGFCN VSNVNSEHSL PSLDEATPEN SPSEQNDIIP  180
NYFGSFSETK DFDAWEKSLD DEASNSFWQD IL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009803902.15e-77PREDICTED: LOW QUALITY PROTEIN: transcription factor MYB39-like
TrEMBLA0A1U7YIH11e-75A0A1U7YIH1_NICSY; LOW QUALITY PROTEIN: transcription factor MYB39-like
STRINGXP_009803902.12e-76(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.21e-24myb domain protein 9