PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01046g21001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 124aa    MW: 13770.1 Da    PI: 5.2171
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01046g21001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.34.4e-142441055
                       AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                              +k+g+WvAeIr+p   +kr r++lg++ ++  Aa+a++ a  +l+g
  Peinf101Scf01046g21001.1  2 RKWGKWVAEIREP---NKRSRIWLGSYSSPVAAARAYDTAVFYLRG 44
                              46**********9...336*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003806.7E-29158IPR001471AP2/ERF domain
CDDcd000181.33E-24154No hitNo description
Gene3DG3DSA:3.30.730.103.3E-25154IPR001471AP2/ERF domain
PROSITE profilePS5103218.993152IPR001471AP2/ERF domain
PfamPF008473.6E-8244IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-18254IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    Send to blast
MRKWGKWVAE IREPNKRSRI WLGSYSSPVA AARAYDTAVF YLRGPSARLN FPESIVRDDD  60
HIQDLSSAAI RKKATEVGAK VDALESALHA SSSSTESNLT CSNSNTYSVD LNEYPNPESC  120
EEDN
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015071928.12e-63ethylene-responsive transcription factor ERF010
SwissprotO221741e-44ERF08_ARATH; Ethylene-responsive transcription factor ERF008
TrEMBLA0A1S3YKB52e-61A0A1S3YKB5_TOBAC; ethylene-responsive transcription factor ERF010-like
TrEMBLA0A1U7XW502e-61A0A1U7XW50_NICSY; ethylene-responsive transcription factor ERF010-like
STRINGXP_009796242.14e-62(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9432390
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50260.12e-42cooperatively regulated by ethylene and jasmonate 1
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Sazegari S,Niazi A,Ahmadi FS
    A study on the regulatory network with promoter analysis for Arabidopsis DREB-genes.
    Bioinformation, 2015. 11(2): p. 101-6
    [PMID:25848171]