PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01050g00003.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Dof

Protein Properties

Length: 314aa MW: 34432.2 Da PI: 9.9456

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01050g00003.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.7	5.4e-38	70	130	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalr vPvGgg+r+nk+s+ Peinf101Scf01050g00003.1 70 PETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRST 130 67899*****************************************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	6.0E-31	53	123	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.6E-32	73	128	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.292	74	128	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	76	112	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence Send to blast
MAFSSAPIYL DPSNWQQQQQ QQLGVANESR SSQLSPTMPP PPAIGGGGTC STRPGSMADR 60 ARISKIITQP ETALKCPRCE STNTKFCYFN NYSLSQPRHF CKTCRRYWTR GGALRSVPVG 120 GGCRRNKRST KGSTRSKSPG RGEKRNISPS STNATASNNI IMSHLPTPPP HNLSFLTTPL 180 HNLSNFSSTE NGLNFGGIIQ PQGGTSDHQM SLSARFADQF RFQQMQQFPF FSALENPSNL 240 YQFQAVEYDH VGATNNIGSK AFESDEVTNV KVEENKSANN SQGLNLSRNN LGVASNQFWT 300 DISGYNSTST SQLL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009619177.1	1e-118	PREDICTED: dof zinc finger protein DOF3.6-like
TrEMBL	A0A1S3YKE3	1e-115	A0A1S3YKE3_TOBAC; dof zinc finger protein DOF3.6-like
STRING	XP_009619177.1	1e-118	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	1e-39	OBF-binding protein 3