PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01050g07014.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family GATA
Protein Properties Length: 84aa    MW: 9050.23 Da    PI: 7.9296
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01050g07014.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA29.21.3e-093150120
                      GATA  1 CsnCgttkTplWRrgpdgnk 20
                              C+ Cgt+kTplWR gp g+k
  Peinf101Scf01050g07014.1 31 CVDCGTSKTPLWRGGPAGPK 50
                              ******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501149.3152548IPR000679Zinc finger, GATA-type
SMARTSM004010.00662560IPR000679Zinc finger, GATA-type
SuperFamilySSF577164.75E-52649No hitNo description
Gene3DG3DSA:3.30.50.102.1E-73048IPR013088Zinc finger, NHR/GATA-type
PfamPF003204.3E-73150IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    Send to blast
MVELSDKNIG SEEMSSEITC VETSESHVKT CVDCGTSKTP LWRGGPAGPK RPRSRSNSSQ  60
RRKLGEVEQA AFLLMALSCG SVYG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006345974.12e-20PREDICTED: GATA transcription factor 17-like isoform X3
RefseqXP_006345975.12e-20PREDICTED: GATA transcription factor 17-like isoform X4
TrEMBLM1C5G54e-19M1C5G5_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000602413e-18(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.19e-14GATA transcription factor 15