PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01057g04016.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Trihelix
Protein Properties Length: 307aa    MW: 35242.8 Da    PI: 8.3528
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01057g04016.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix31.16.3e-101886270
                  trihelix  2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70
                              Wt +e+l+L++  ++++ + +++ +  ++W++  +++ + g++rs +qCk++we +   y k+k  ekk
  Peinf101Scf01057g04016.1 18 WTLHETLTLVNEMNSTQAECGNKLSSFQKWQSTVQQCNSLGVNRSLNQCKKRWEFIIESYNKVKPYEKK 86
                              ***************************************************************998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.4E-91686No hitNo description
PROSITE profilePS500906.1561874IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009506Cellular Componentplasmodesma
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MDRTSGSLRT RSQAAPDWTL HETLTLVNEM NSTQAECGNK LSSFQKWQST VQQCNSLGVN  60
RSLNQCKKRW EFIIESYNKV KPYEKKYWKA SFKKRDLGLP ENFELELFKA IDGYFKGLQG  120
EDGGKGADTD PDSDPEAQPV RPKRQRRRTK PQRYRMEERL NPWRRILNEN RMYEQSKMGI  180
KHEASIDAKL EAPRLEKPRV EIKHETSSPE EKVELPNLSM VGEVNAEQVN VDNPEDMMAA  240
TLRENAELIT AIVEGNSMNN RDCRLADLKN VEAGRVQLIR SQGSQLIDCL GKISDTLSQL  300
CDSIHKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016453700.11e-175PREDICTED: trihelix transcription factor ASR3-like
TrEMBLA0A1S3YP061e-173A0A1S3YP06_TOBAC; trihelix transcription factor ASR3-like
STRINGXP_009603649.11e-171(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA83602124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.11e-41sequence-specific DNA binding transcription factors