PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01064g01019.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 145aa    MW: 16239.6 Da    PI: 4.1332
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01064g01019.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.41.6e-081442129
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIar 29
                              +g+W +eEde+l+  v+ lG ++W++ a+
  Peinf101Scf01064g01019.1 14 KGSWHEEEDERLASIVAILGERRWDALAK 42
                              799**********************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.7E-8843IPR009057Homeodomain-like
PROSITE profilePS500906.992954IPR017877Myb-like domain
SuperFamilySSF466893.02E-51143IPR009057Homeodomain-like
PfamPF002492.6E-61442IPR001005SANT/Myb domain
CDDcd001675.94E-41642No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MAFQLIMQEE ELRKGSWHEE EDERLASIVA ILGERRWDAL AKASECCGSN TSKSGQISSA  60
SKSDSINAPN NSTGDSISGK DDCSSADSNE TGLSDWIPSW SYEQSQMEHH MYLCRLNLCF  120
CHPQCFSEDN NISTWDDTSS SIWEQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016444726.15e-35PREDICTED: transcription factor MYB48-like
TrEMBLA0A1S3XXP81e-33A0A1S3XXP8_TOBAC; transcription factor MYB48-like
STRINGXP_009625011.15e-35(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53200.11e-10myb domain protein 27