PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01077g15028.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family HD-ZIP
Protein Properties Length: 253aa    MW: 28973.1 Da    PI: 9.38
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01077g15028.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.35.4e-1889143256
                               T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                  Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                               rk+ ++t eq + Lee F+++ ++   +++eLA+kl+L+ rqV vWFqNrRa+ k
  Peinf101Scf01077g15028.1  89 RKKLRLTIEQSTLLEESFKRHTTLAMGQKQELAAKLKLKPRQVEVWFQNRRARTK 143
                               6778899**********************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466898.13E-1778146IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.0E-1783149IPR009057Homeodomain-like
PROSITE profilePS5007116.71485145IPR001356Homeobox domain
SMARTSM003898.0E-1587149IPR001356Homeobox domain
PfamPF000462.6E-1589143IPR001356Homeobox domain
CDDcd000868.57E-1389146No hitNo description
PROSITE patternPS000270120143IPR017970Homeobox, conserved site
PfamPF021831.1E-8145177IPR003106Leucine zipper, homeobox-associated
SMARTSM003407.3E-13145189IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MGNDNDACDT RLTLGLGLAS TDLIPKRNQE EEKNVICLDL SIPLHADHGT KTEGFSSKTC  60
ENDEKQDTKG TISLRNFNYK IDNKKNGMRK KLRLTIEQST LLEESFKRHT TLAMGQKQEL  120
AAKLKLKPRQ VEVWFQNRRA RTKLKQTEVD CEMLKKWCQS LNNENNRLKK ALQELRSSFK  180
IDQWPITPFH LQLPKPRTIA LCPSCQKISR SGTNDHIERA AVLIENINSE QKQCDAMCTG  240
ANSDNIFIKE SNK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1137145RRARTKLKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009630679.11e-105PREDICTED: homeobox-leucine zipper protein HAT9-like
TrEMBLA0A1U7VN601e-103A0A1U7VN60_NICSY; homeobox-leucine zipper protein HAT9-like
STRINGXP_009630679.11e-105(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29024186
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.14e-41homeobox from Arabidopsis thaliana