PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01099g01019.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family HSF
Protein Properties Length: 685aa    MW: 77972.2 Da    PI: 9.1483
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01099g01019.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind83.92.3e-26311222102
                               HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXX CS
              HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksF 86 
                               Fl+k++e++ed++++++i+w  +g+sf+++d+ ++ +++LpkyFkh+n++SF+ QL  YgFk++   +         we+++ +F
  Peinf101Scf01099g01019.1  31 FLMKTFEMVEDPNTNSIIKWGPTGTSFIICDHLRLCSELLPKYFKHTNLSSFTYQLSNYGFKSIGVLQ---------WEYENYWF 106
                               9***************************************************************9988.........******** PP

                               XXXXXXXXXXXXXXXX CS
              HSF_DNA-bind  87 kkgkkellekikrkks 102
                               ++gk +ll++i r+ +
  Peinf101Scf01099g01019.1 107 QAGKSHLLTNIIRRDQ 122
                               ***********99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.106.4E-2724114IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467854.62E-2427120IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004154.7E-3427120IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000567.4E-143154IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004478.2E-2331120IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000567.4E-146981IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000567.4E-148294IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE profilePS5001126.252193637IPR000719Protein kinase domain
SMARTSM002207.5E-34223637IPR000719Protein kinase domain
Gene3DG3DSA:3.30.200.201.2E-13224293No hitNo description
PfamPF000691.4E-14238353IPR000719Protein kinase domain
SuperFamilySSF561121.3E-70241356IPR011009Protein kinase-like domain
CDDcd141364.83E-177241637No hitNo description
Gene3DG3DSA:1.10.510.104.9E-66294383No hitNo description
PROSITE patternPS001080340352IPR008271Serine/threonine-protein kinase, active site
Gene3DG3DSA:1.10.510.104.9E-66466638No hitNo description
SuperFamilySSF561121.3E-70470649IPR011009Protein kinase-like domain
PfamPF000691.1E-19476637IPR000719Protein kinase domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 685 aa     Download sequence    Send to blast
MAMNNINQFP TREKGNGGNK GLRKSHRVPP FLMKTFEMVE DPNTNSIIKW GPTGTSFIIC  60
DHLRLCSELL PKYFKHTNLS SFTYQLSNYG FKSIGVLQWE YENYWFQAGK SHLLTNIIRR  120
DQSLKLQINW YQSGVEAEMK SQREVNSRLK SEIEMLKDKQ DNLANGIASL KGYMENSDDN  180
FRKLLYFLEK SFKQVATQHG EKERLSVITN KRKAEDIQEN SENFGRKLCV MQKPKIEKKT  240
LKVQKSAQHY TEAAMDEITI LKQIAEGDPD GKKGVVKLLD HFKHSGPNGQ HVCMVFEYLG  300
DNLLTLIKYI DYRGLPIHMV KELCFHVLVG LDYLHRQLSI IHTDLKPENI LLCSTIDPSK  360
DPRKSGAPLI LSSNNDKASL EFGAVKGHVT FNGNITKNQK KKIRRKAKEA AQGFAGNKAV  420
ELFLNADLPT DQLVGSANVN RLSNDDAATA SGKDYVGSKR SSGSTRKKSL ESVDLKCKLV  480
DFGNACWTYK QFTDNIQTRQ YRCPEVILGS KYSTSADLWS FACICFELAT GDVLFDPHSG  540
DNFDRDEDHL ALMMELLGTM PRKIALGGRY SREFFNRHGD LRHIRRLRFW PLDKVLVEKY  600
EFSEQDAKDL ADFLIPILDF VPEKRPTAAQ CLLHPWINAG PYSLEPRLPD AQSKAADTIN  660
SEQTKREKEK KEAAMEVGMG KMVIN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5my8_A8e-9924063952383SRSF protein kinase 1,SRSF protein kinase 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1398404QKKKIRR
2662670QTKREKEKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755220.0HG975522.1 Solanum lycopersicum chromosome ch10, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016440720.10.0PREDICTED: SRSF protein kinase 1-like
TrEMBLA0A1S3XL540.0A0A1S3XL54_TOBAC; SRSF protein kinase 1-like
STRINGPGSC0003DMT4000216390.0(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54070.13e-31heat shock transcription factor A9