PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01109g08009.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Nin-like

Protein Properties

Length: 253aa MW: 28632.6 Da PI: 9.8194

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01109g08009.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	36.7	8.4e-12	27	52	25	50
RWP-RK 25 LgvclTvLKriCRqyGIkRWPhRkik 50 Lgvc++vLK+iC ++G+ RWP+Rk+ Peinf101Scf01109g08009.1 27 LGVCTSVLKKICYENGLVRWPYRKVI 52 8***********************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	11.638	1	74	IPR003035	RWP-RK domain
Pfam	PF02042	3.0E-10	27	51	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence Send to blast
CIQCLPNFHF LIHTITKTFY VFDIYLLGVC TSVLKKICYE NGLVRWPYRK VISGKSIEDI 60 KKEALREKQE RLMEFPKAAG EKGYPLQNKS TSSTMEMPKA GAFSQQQGTK NAQSGTLPHF 120 RISNLPKGTS DSHDEFKYGF PSDGLSTVTN RWWGNKSPDG YQDSQLSDND KNSKEEAENR 180 AEKTKCKSSV DSIGTSLLTD LRKRAVKEGK ATLRLGVCRG HRANMLDSTK RKILLQVFKS 240 YFHVHGDMSN FDS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009600090.1	1e-130	PREDICTED: uncharacterized protein LOC104095632
TrEMBL	A0A1S4A4S3	1e-128	A0A1S4A4S3_TOBAC; uncharacterized protein LOC107793702
STRING	XP_009600090.1	1e-129	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA10744	19	21