PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01123g09009.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

FAR1

Protein Properties

Length: 178aa MW: 20805.5 Da PI: 7.589

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01123g09009.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22.1	5.1e-07	80	120	50	90
FAR1 50 kerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 + +r+r+etr g k ++ +k++ kwevt+l+++Hn el+ Peinf101Scf01123g09009.1 80 ECNRQREETREGYKVMIYFSKKEARKWEVTRLVSDHNQELT 120 56799********************************9996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	8.4E-5	79	120	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence Send to blast
MLQNKQETSN ILKENIEGVG ASLEELESDM NVMVAEERGE PYNSMDFPSL DIAYEFYLNY 60 AHRSDFSFVQ KKNFIQKGVE CNRQREETRE GYKVMIYFSK KEARKWEVTR LVSDHNQELT 120 SPYNRKFLHS KRKKSEAQKN LIDPLDTSGI RPSKIASEFK TKSLKASLKT LYPMEDEA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019068484.1	1e-47	protein FAR1-RELATED SEQUENCE 5
TrEMBL	A0A3Q7EE03	1e-43	A0A3Q7EE03_SOLLC; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA645	8	60

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-13	FAR1-related sequence 5