PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01139g00007.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 232aa    MW: 26660.2 Da    PI: 4.6688
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01139g00007.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.68.1e-12162205654
                               HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                                ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  Peinf101Scf01139g00007.1 162 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 205
                               589*********************66......****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.491156205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.71E-15159214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.1E-10162205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.4E-13162211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-15163224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.48E-5163210No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MELTEQDLLE ELLSPRRESY STFSGEVNEV FPNGFTFDST FYQNQEFVAL NSSLLGLITP  60
QEPNFLCPNF TSQQSYPILD SLINDTLPLQ VQDEYATSNR AMLENEGLGI MASDFHVLQE  120
DLNCFNNDVK VEDATSRIMG VSNVGEKKNK VKKLEGQPSK NLMAERRRRK RLNDRLSMLR  180
SIVPKISKMD RTSILGDTID YMKELLEKIQ TLREDDKVKD EIKDIKFVGN FK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1164171ERRRRKRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754412e-46HG975441.1 Solanum pennellii chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019225226.11e-119PREDICTED: transcription factor bHLH93-like
TrEMBLA0A314KTP21e-118A0A314KTP2_NICAT; Transcription factor bhlh93
STRINGXP_009600953.11e-117(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7892497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.24e-28beta HLH protein 93