PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01151g00005.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bZIP

Protein Properties

Length: 243aa MW: 27676.2 Da PI: 10.3521

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01151g00005.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.2	2.3e-10	38	82	2	46
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 ++ k rr+++NReAAr+sR+RKka++++Le +L++ ++L+ Peinf101Scf01151g00005.1 38 RDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQELQ 82 567899*************************98888887776554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.6E-8	34	84	No hit	No description
SMART	SM00338	1.3E-8	37	100	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.461	39	83	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.8E-7	40	82	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.25E-7	41	84	No hit	No description
PROSITE pattern	PS00036	0	44	59	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	3.7E-30	124	195	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence Send to blast
MVDISPSTST DADTDEKNRY LNAQQLVAVA SDGSDRTRDQ KTLRRLAQNR EAARKSRLRK 60 KAYVQQLESS RMKLTQLEQE LQRARQQGIF ISGSGDQSQS MSGNGALAFD VEYARWLEEH 120 NRRVNELRGA VNSHAGDAEL RIIVDGILAH YDDIFRIKGD AAKADVFHIL SGMWKTPAER 180 CFLWLGGFRS SELLKADNLR QQTLQQMHRI LTTRQSARAL LAISDYFSRL RALSSLWLAR 240 PRE

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AF031487	0.0	AF031487.1 Nicotiana tabacum bZIP transcription factor (TGA2.2) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022850452.1	1e-141	transcription factor TGA2.3-like isoform X2
Swissprot	P23923	1e-106	HBP1B_WHEAT; Transcription factor HBP-1b(c38)
TrEMBL	A0A1J6KFU5	1e-133	A0A1J6KFU5_NICAT; Transcription factor tga2
TrEMBL	A0A1U7XYD3	1e-133	A0A1U7XYD3_NICSY; transcription factor TGA2-like
TrEMBL	Q9SQK1	1e-133	Q9SQK1_TOBAC; BZIP transcription factor
STRING	XP_009794636.1	1e-134	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA21364	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.2	9e-86	TGACG motif-binding factor 6

Publications ? help Back to Top
Tabata T,Nakayama T,Mikami K,Iwabuchi M HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat. EMBO J., 1991. 10(6): p. 1459-67 [PMID:2026143]