PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01175g06020.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 479aa    MW: 52553 Da    PI: 6.514
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01175g06020.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.67e-063684061154
                               HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  Peinf101Scf01175g06020.1 368 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 406
                               5778999**********998.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.54E-7349410No hitNo description
PROSITE profilePS5088812.347357406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.1E-12367425IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-9367417IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0036368412IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 479 aa     Download sequence    Send to blast
MAEEFQLGRG NWWESSSSSS TSSSRNKFDS GISSTTPSAA STALSSMASN FDWPTEIVDI  60
KATSSLHLGT VYPADSQKLH ASESSLGGGE GRGVLSTDPN LQMMGLGLPS QGIDWNQPFF  120
RGEKAGSGFR SILQEGLNLD VNYQQEGASC QQDQQWTQKN MYHGNSDDSS VNDYKQQMNR  180
GITLDHQPVF NANMSSNLEN ASAYGSPSNM LQGLLISDSH NQESNFTSVR PMYNYPPYNP  240
SNCDVNNPPA ADVMPTSSSS SSWSKFPPFL RTSSPPKQQW PLQPPHGQSH FSNSTSPFWN  300
STSASMDDVR SGFIPSLLPQ IANPTIDEKP KHTGEVRDIS KIVKKTNVET SNKRPRNEAP  360
SPMPAFKVRK EKMGDRITAL QQLVSPFGKT DTASVLSEAI EYIKFLHEQV NVLSTPYMKS  420
GAAMQHHQST SDKSNNPEGV KQQDLRSRGL CLVPVSSTFP VTHETTVDFW TPSFGGTFR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016453648.10.0PREDICTED: transcription factor bHLH112-like
SwissprotQ8GXT31e-77BH123_ARATH; Transcription factor bHLH123
TrEMBLA0A1S3YNG40.0A0A1S3YNG4_TOBAC; transcription factor bHLH112-like
STRINGXP_009617831.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8602486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.12e-76bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]