PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01175g08077.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

GeBP

Protein Properties

Length: 305aa MW: 34809.7 Da PI: 4.2624

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01175g08077.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	30.8	8.1e-10	196	281	12	97
DUF573 12 eivlLqGlidfkaktgkspsddidafyefvkksi.sfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 ++++L+ + f ++g ps d++++ + +si ++k+ ++l++Ki L +Kfk+ ++ + ++ ++ + d++if+ls++i Peinf101Scf01175g08077.1 196 DLAILKSISHFYYSNGYVPSPSSDELHNHIMDSIpNLKILGEELINKIVTLEDKFKTVREL-DGDNPDNMPCPIDREIFGLSMSI 279 689****************************95589***************9998.677777899************ PP DUF573 96 Wg 97 Wg Peinf101Scf01175g08077.1 280 WG 281 *8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	6.0E-7	196	281	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence Send to blast
MLHAENPNPV SYSSSNISSP PQAQHKIDKN VTCTEPFDQI MENEGQQLVI VDASSTNSTR 60 NERKRLSFSD EDERNATEAV SNVTKKCRVN SSTSYDETEE VVQEMKRNEK EENDHGQNEI 120 GEIYGNQESE RYEGGEEDNN QEENEKRKAI KKGKRPVPKY SKFVYGETSY RAEEETKNNS 180 PKDDELNLDN NDDFQDLAIL KSISHFYYSN GYVPSPSSDE LHNHIMDSIP NLKILGEELI 240 NKIVTLEDKF KTVRELDGDN PDNMPCPIDR EIFGLSMSIW GNSGNNGDAE LNQEFYDMNI 300 QNENS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016453452.1	2e-52	PREDICTED: protein PFC0760c-like
TrEMBL	A0A1S3YN79	5e-51	A0A1S3YN79_TOBAC; protein PFC0760c-like
STRING	XP_009630430.1	6e-44	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5014	3	7