PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01192g03036.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 214aa    MW: 24807.7 Da    PI: 10.3329
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01192g03036.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM97.52e-30181511128
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk....sg 81 
                               lp GfrFhPtdeel v+yL kk+ + +l++  + ++ d++++ P dLp  +   +++ yfFsk++ + +++k  +r ++    sg
  Peinf101Scf01192g03036.1  18 LPIGFRFHPTDEELFVHYLSKKIFSMPLPALIIPEHHDVFHTFPCDLPGDL---REKRYFFSKTNGHINNSKGCSRLISgrdySG 99 
                               699***************************6656666***********544...4578**********9999999965446779* PP

                       NAM  82 yWkatgkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                               yW+a g+ + +++      +g + g+kk++ fy+ ++ k+ +t+Wvmh+y+l
  Peinf101Scf01192g03036.1 100 YWNAIGQGQLIMVPfphqqQGLVLGMKKVFRFYQTNQIKSLRTRWVMHQYSL 151
                               ************99986655666***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.4E-4113174IPR003441NAC domain
PROSITE profilePS5100537.43918174IPR003441NAC domain
PfamPF023651.1E-1919151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MEEKKEGAKT GTVGKLNLPI GFRFHPTDEE LFVHYLSKKI FSMPLPALII PEHHDVFHTF  60
PCDLPGDLRE KRYFFSKTNG HINNSKGCSR LISGRDYSGY WNAIGQGQLI MVPFPHQQQG  120
LVLGMKKVFR FYQTNQIKSL RTRWVMHQYS LVSTSQNVNM MQVGDWSIFR IYQRKLKSKN  180
VIRAKANALA EQCNKTNTCK RPLSAMLLQE NEFH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-221417511169Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF5098680.0AF509868.1 Petunia x hybrida nam-like protein 5 (NH5) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009767338.11e-103PREDICTED: NAC domain-containing protein 68-like isoform X2
RefseqXP_016459882.11e-103PREDICTED: NAC domain-containing protein 41-like isoform X2
TrEMBLQ8LRM01e-147Q8LRM0_PETHY; Nam-like protein 5
STRINGXP_009767337.11e-101(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA132501318
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.13e-36NAC domain containing protein 41