PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01199g04008.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 256aa    MW: 28848.6 Da    PI: 4.2754
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01199g04008.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.31.3e-111445132
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                              +g+WT+eEd++l+d++k++G g+W+t ++  g
  Peinf101Scf01199g04008.1 14 KGPWTPEEDQKLIDYIKEHGYGNWRTLPKNAG 45
                              79*************************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.9E-13543IPR009057Homeodomain-like
SuperFamilySSF466891.86E-9845IPR009057Homeodomain-like
PROSITE profilePS5129412.394955IPR017930Myb domain
PfamPF002495.3E-91445IPR001005SANT/Myb domain
CDDcd001671.88E-71646No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MGRAPCCDKN GLKKGPWTPE EDQKLIDYIK EHGYGNWRTL PKNAGHVQPL VNPEVLRLAT  60
SLLSSQRQNS NFLMPNNVQE NQICISQVQN QVHPMVQVTS QVQNPIQNIP TCTTLSTTPS  120
VPFYDDARLM EQFSSNLVNS SSQNCQVNEW QSSGMASNLT DQDYFNNPLQ NYGYYHELDQ  180
SIRDPPLSDA STFQSNDSNN FSFQSVLSNL STPSSSPTPL NSNSTTTEDE RDNSYCSNML  240
NFDNIPNIWD STNEFM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754411e-51HG975441.1 Solanum pennellii chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019229348.11e-106PREDICTED: protein ODORANT1
TrEMBLA0A314KLT61e-105A0A314KLT6_NICAT; Transcription factor myb39
STRINGXP_009801248.11e-101(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.19e-25MYB-like 102