PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01262g01020.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bZIP

Protein Properties

Length: 182aa MW: 21357 Da PI: 5.6077

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01262g01020.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.9	6.1e-15	87	145	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +r rr+++NRe+ArrsR RK+ ++eL v L +eN++L+++l++ ++ +++ +e+ Peinf101Scf01262g01020.1 87 RRKRRMISNRESARRSRMRKQRHLDELWSQVLRLRTENHTLIEKLNQVSESHERVLQEN 145 799***********************************************999998886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.5E-16	83	147	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.254	85	148	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.9E-11	87	160	No hit	No description
SuperFamily	SSF57959	2.32E-12	87	137	No hit	No description
Pfam	PF00170	8.3E-13	87	145	IPR004827	Basic-leucine zipper domain
CDD	cd14702	5.28E-20	88	138	No hit	No description
PROSITE pattern	PS00036	0	90	105	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence Send to blast
MIPSEAAATH YFATENPSPL PLDFNFMQNM SSPTFQFSRY LTNLQNYPTS LAVHHDFNNN 60 LPLPSCISGN STSDEADEQQ LRVIDERRKR RMISNRESAR RSRMRKQRHL DELWSQVLRL 120 RTENHTLIEK LNQVSESHER VLQENVQLKE EATDLRQMLT DIQLINSPFP DFSDLEEIMI 180 II

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	99	106	RRSRMRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269\|PubMed:26973252}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009774323.1	2e-96	PREDICTED: basic leucine zipper 43-like
Refseq	XP_016460448.1	2e-96	PREDICTED: basic leucine zipper 43-like
Swissprot	Q9FMC2	2e-40	BZP43_ARATH; Basic leucine zipper 43
TrEMBL	A0A1S3Z7S0	4e-95	A0A1S3Z7S0_TOBAC; basic leucine zipper 43-like
TrEMBL	A0A1U7W6T0	4e-95	A0A1U7W6T0_NICSY; basic leucine zipper 43-like
STRING	XP_009774323.1	7e-96	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA947	24	92

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	9e-47	basic leucine-zipper 42

Publications ? help Back to Top
Nowak K,Gaj MD Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis. J. Plant Physiol., 2016. 193: p. 119-26 [PMID:26973252] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]