PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01271g01033.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 266aa    MW: 30214.3 Da    PI: 8.4765
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01271g01033.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM34.37.1e-1136664128
                       NAM  64 rdkkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               +++k+ +gk+ nr ++  g+Wk++ k+++v++++++++g  kt+ f ++++   ++ +W m+ey l
  Peinf101Scf01271g01033.1   3 QRRKTVRGKKFNRqIAGGGTWKSQEKQRPVFANNKSVIGFMKTFRFEEENSD--KSIKWYMKEYCL 66 
                               56788899*****777899***************************955544..589*******87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.39193IPR003441NAC domain
SuperFamilySSF1019416.41E-12593IPR003441NAC domain
PfamPF023652.0E-51466IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MTQRRKTVRG KKFNRQIAGG GTWKSQEKQR PVFANNKSVI GFMKTFRFEE ENSDKSIKWY  60
MKEYCLSDIV LKELREGRQI RHEDYVLCRI KRKVKFCSTT NNFQCGEKNV VANRNHNLGS  120
SSSQNQEKVS VSWTPSISKS SEDEFQALQE NTIDVASYHK ELDAYAKAIL ESNPPLVPHI  180
PQELDDCPLF SEDFYIGHHA LWSCDLLQIE ISVNLAAAPV GVHPNMIFEG RMPFQVADPL  240
STSPGKAHKL QSGFAACKDL ELGTNK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1477126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.17e-08NAC domain containing protein 25