PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01271g10007.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family HB-PHD
Protein Properties Length: 745aa    MW: 82067.2 Da    PI: 4.7974
Description HB-PHD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01271g10007.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox39.11.3e-125736181156
                               HHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                  Homeobox  11 qleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                                +++L e+F++n+yp+++ +e L k+lgLt  qV+ WF N R   +
  Peinf101Scf01271g10007.1 573 AIKRLYEYFKENQYPDRDVKEILGKELGLTAHQVSKWFENARFSSR 618
                               6899**************************************8877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579031.84E-13215283IPR011011Zinc finger, FYVE/PHD-type
Gene3DG3DSA:3.30.40.101.0E-12222280IPR013083Zinc finger, RING/FYVE/PHD-type
PROSITE profilePS5001610.967223280IPR019787Zinc finger, PHD-finger
SMARTSM002492.7E-9225278IPR001965Zinc finger, PHD-type
PfamPF006281.7E-10225280IPR019787Zinc finger, PHD-finger
CDDcd155041.05E-26225277No hitNo description
PROSITE patternPS013590226277IPR019786Zinc finger, PHD-type, conserved site
PROSITE profilePS5007112.811560620IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.2E-12562614IPR009057Homeodomain-like
SMARTSM003891.2E-11563624IPR001356Homeobox domain
SuperFamilySSF466891.41E-11564625IPR009057Homeodomain-like
CDDcd000863.78E-11565621No hitNo description
PfamPF000463.7E-10573618IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 745 aa     Download sequence    Send to blast
MRPQLEGRME MSTLGNTALS PEVMATTTAG GHNSVSAVNM SEKPGVVEQS GEACENAVLH  60
LDQSECQEKR PGQPRKRKST SGTPISSTRL LRSQSKEKSG ASETNNTAVT HDATEEKKRK  120
RRKKKRSENA AVNEFTRIRS HLRYLLHRIQ YEQTLIEAYS GEGWKGQSLE KIKLEKELQR  180
ANAHIFRYKL KIRDLFQRLD TLLAQGRLPA SLFDDEGEID SEDIFCAKCG SKELPADNDI  240
VLCDGACERG FHQLCLEPPL LKDDIPPDDE GWLCPGCDCK VDCIELLNDL QGTNLSITDS  300
WEKVYTKEAA AAASGEKLDD ISGLPSDDSE DDDYNPENPD VEKNDSGDES SSDESDFFSA  360
SEDLGEAPSK DDDMLGLPSE DSEDDDFNPD DPDKDEPAKT ENSSSDFTSD SEDLGLVVDT  420
NRLSGDERGV SPSVDSSRPY SASQEEKSEV GIAKGNSLKG ELAYLMQSGV PLLSGKRHVE  480
RLDYKKLNDE TYGNVSSSDS SDEDYGDGPV PKASKIRSAK AAMPSPSLTP ADIKYQSGMQ  540
KGSGRTSDRG RREKLDTSEP HSSGKKKTKG EGAIKRLYEY FKENQYPDRD VKEILGKELG  600
LTAHQVSKWF ENARFSSRHS SRWDSIMSQK ISKESPSSPQ ITAEPLGTES KSTMNDASCN  660
GVEKLEPPNS LPNGEKCHAM EKSEGDLLTQ EASGKKSRKS KAKSDTTDQV LDNTPSKKTP  720
KKQDAQVDTP NSQNVRRSSR LQKQG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1116121KKRKRR
2116123KKRKRRKK
3117122KRKRRK
4117125KRKRRKKKR
5119125KRRKKKR
6120125RRKKKR
7120126RRKKKRS
Functional Description ? help Back to Top
Source Description
UniProtSpecifically binds to the fungal elicitor-responsive DNA element, 5'-CTAATTGTTTA-3', of the gene PR2 promoter.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By pathogen infection.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009775281.10.0PREDICTED: pathogenesis-related homeodomain protein
RefseqXP_009775282.10.0PREDICTED: pathogenesis-related homeodomain protein
SwissprotP487861e-131PRH_PETCR; Pathogenesis-related homeodomain protein
TrEMBLA0A1U7W5G50.0A0A1U7W5G5_NICSY; pathogenesis-related homeodomain protein
STRINGXP_009775281.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72202126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19510.12e-95Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain