PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01272g05023.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 331aa    MW: 37669.1 Da    PI: 5.3998
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01272g05023.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.72.8e-15130181155
                               CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i+  A++Y+k+L+
  Peinf101Scf01272g05023.1 130 QRMTHIAVERNRRKQMNEYLDVLRTLMPES---YVQRGDQASIVSGAINYVKELE 181
                               79****************************...9******************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.87E-15128185No hitNo description
SuperFamilySSF474595.1E-18129199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.012129180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.6E-15129185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-12130181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.8E-12135186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MALEAVTYQQ QYLYTLLGTA ANWGGGSGSG NFDDHNNEAF EYLEHQNVAA EEYEHYSNWN  60
LPPPLLVESQ VDFHQWDQNC STILHHDFRI PDQPGLLPQL DSPVAISSTT SRPRRRRTRT  120
KKNEEQIENQ RMTHIAVERN RRKQMNEYLD VLRTLMPESY VQRGDQASIV SGAINYVKEL  180
EQQLQFLSGQ KHFNDYKQDV VSGETSPFSE FFSIPQYSTT MTTATSENGG SGNEYYMNQV  240
PAAADIEVTM VENHANLKIR SKRRPRLVPR IISGLEGLRL TVLHLNVTKA DQFVFCSLSL  300
KVEEDCKMSS VEDIAAVVNQ ILGRIHEEAL A
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111118RPRRRRTR
2130141RMTHIAVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019258700.11e-177PREDICTED: transcription factor bHLH94-like
SwissprotQ9C7T42e-70BH096_ARATH; Transcription factor bHLH96
TrEMBLA0A314LGS01e-175A0A314LGS0_NICAT; Transcription factor bhlh96
STRINGXP_009617734.11e-175(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA132271518
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.16e-73bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]