PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01292g03014.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 268aa    MW: 30295 Da    PI: 8.2954
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01292g03014.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM61.92e-1951403128
                       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevi.kevdiykv.ePwdLpk........kvkaeekewy.fFskrdkkyatgkrknr 76 
                                GfrF+P+d+e +  +L + +++++l+   +i ++vd+y   ePw++ +          +ae+ + y fF+++ k++++gkr +r
  Peinf101Scf01292g03014.1   5 LGFRFRPSDSERL-SFLLRFITKHDLRDRGFIsTNVDVYGKeEPWEIYHrgipcgggDGEAEDCSSYrFFITKLKTKNNGKRFKR 88 
                               6***********9.8899999999988878861566*996549****7446776654222233333449999999999******* PP

                       NAM  77 atksgyWkatgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128
                                + +g+Wk+  ++k v+++k++++g kk++ + ++  + ++   +W+m+ey++
  Peinf101Scf01292g03014.1  89 EVGKGTWKQD-NTKLVHNEKSAVIGSKKSMSYVNKkLDTEALGGKWLMKEYEF 140
                               ********76.56899999**************65256777799*******85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.2433163IPR003441NAC domain
SuperFamilySSF1019411.7E-183163IPR003441NAC domain
PfamPF023652.5E-116139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MEFELGFRFR PSDSERLSFL LRFITKHDLR DRGFISTNVD VYGKEEPWEI YHRGIPCGGG  60
DGEAEDCSSY RFFITKLKTK NNGKRFKREV GKGTWKQDNT KLVHNEKSAV IGSKKSMSYV  120
NKKLDTEALG GKWLMKEYEF SKVILRKFPE DCKDYVLCAI RKKPSTSSST TTPMLNSSAS  180
SVRDQETEVT NTTSVDNSWA MVSSSEQYSQ SKTMTSLNFQ ESHDAMGSMV LVNDSSTVVE  240
GTSYFGQHSV YDIQPAATLS FVGFVNQN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016475806.13e-62PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A1S4AGN16e-61A0A1S4AGN1_TOBAC; NAC domain-containing protein 78-like
STRINGXP_009631312.11e-61(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1632426
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15500.12e-11NAC domain containing protein 3