PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01294g01005.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 155aa    MW: 17718.8 Da    PI: 10.1568
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01294g01005.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.11.5e-054062123
                              EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                              y+C++C k F+++  L  H++ H
  Peinf101Scf01294g01005.1 40 YECNYCFKNFPTSQALGGHQNAH 62
                              99******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.89E-73767No hitNo description
Gene3DG3DSA:3.30.160.602.1E-43866IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.5724067IPR007087Zinc finger, C2H2
PfamPF139122.7E-64064IPR007087Zinc finger, C2H2
PROSITE patternPS0002804262IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MTTFNMSKSI VETNTVNLAN HIAKESYNVV NNIEESRKKY ECNYCFKNFP TSQALGGHQN  60
AHKKERQQAY KAHNFHNHHS TWANNISIAR FYGRHDVNYV TSPYSKISPL AFRRAPPADG  120
SKIFPKIKSS KSESRFGYEP KKGVQDGQVS LDLHL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019267119.12e-41PREDICTED: zinc finger protein 8-like
TrEMBLA0A314KZD02e-39A0A314KZD0_NICAT; Zinc finger protein 8
STRINGXP_009619423.12e-38(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14731526
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58070.12e-16C2H2 family protein