PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01300g00003.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

ZF-HD

Protein Properties

Length: 178aa MW: 19165.8 Da PI: 7.4335

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01300g00003.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	97.8	8.1e-31	115	167	3	56
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRre 56 +v+Y eClkNhAa++Gg+a+DGC+Efmps geegt +alkC+AC CHRnFHR+ Peinf101Scf01300g00003.1 115 GVKYMECLKNHAAAIGGNAIDGCCEFMPS-GEEGTLEALKCSACHCHRNFHRKL 167 689***********************9.999*****************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04770	9.3E-28	116	166	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDom	PD125774	6.0E-20	117	166	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMs	TIGR01566	6.4E-28	117	166	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	26.926	118	167	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence Send to blast
MRQWRGGGSM LAVIMTSRNV KDKVSTSMPT SNNSNSMLEL SWIAILGGPE ALDLHGRRIR 60 VNYAIEKRRD GFEGFGGYAT INYGCGGGVY SGGTSFHGEG DKAGGNNDNI IDEGGVKYME 120 CLKNHAAAIG GNAIDGCCEF MPSGEEGTLE ALKCSACHCH RNFHRKLLQV LLIYSILV

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA18379	2	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24660.1	3e-26	homeobox protein 22