PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01332g01010.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family GATA
Protein Properties Length: 226aa    MW: 25350.7 Da    PI: 8.2039
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01332g01010.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.87.2e-19151184134
                      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                               C++C  tkTplWR+gp g+ktLCnaCG++yr+ +
  Peinf101Scf01332g01010.1 151 CTHCEITKTPLWREGPLGPKTLCNACGVRYRSGR 184
                               *******************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF577162.14E-15143207No hitNo description
SMARTSM004016.2E-16145195IPR000679Zinc finger, GATA-type
PROSITE profilePS5011412.07149181IPR000679Zinc finger, GATA-type
CDDcd002025.68E-15150197No hitNo description
Gene3DG3DSA:3.30.50.103.2E-15150182IPR013088Zinc finger, NHR/GATA-type
PfamPF003201.3E-16151184IPR000679Zinc finger, GATA-type
PROSITE patternPS003440151176IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MVEQNCWDGI PMGLDEDFES ILNNLEFPLE SLDEDWDDSV YQFLEPIPLD DEVFLNELSE  60
AQGTVSFQTQ SPVSVLEQSS SCFDGKSISF KSATKRRRSK RAQSSTLSPW LLMAPISCAA  120
FKSKKNSDAK KGKEKKRRNL SQLSGASVKK CTHCEITKTP LWREGPLGPK TLCNACGVRY  180
RSGRLFPEYR PASSPTFVPS LHSNSHRKVT EMRKKAPTEL EFCSSG
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00130DAPTransfer from AT1G08010Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009774660.11e-102PREDICTED: GATA transcription factor 11-like
RefseqXP_016486021.11e-102PREDICTED: GATA transcription factor 11-like
SwissprotQ6DBP84e-43GAT11_ARATH; GATA transcription factor 11
TrEMBLA0A1S4BB311e-100A0A1S4BB31_TOBAC; GATA transcription factor 11-like
TrEMBLA0A1U7WK811e-100A0A1U7WK81_NICSY; GATA transcription factor 11-like
STRINGXP_009774660.11e-101(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31342149
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.26e-39GATA transcription factor 11