PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01345g01007.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family G2-like
Protein Properties Length: 381aa    MW: 43025.5 Da    PI: 9.2224
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01345g01007.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like58.61.3e-18207243238
                   G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkv 38 
                               pr+rWt+ LH+rF++ave LGG+e+AtPk++lelm++
  Peinf101Scf01345g01007.1 207 PRMRWTSSLHARFIHAVELLGGHERATPKSVLELMDM 243
                               9**********************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.84E-6203243IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.4E-14205243IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-12207246IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MELFPAQPDL SLQISPPNSK PSSAWKRTNS TTDNEMNLLF WRRALESKNS ISKVPDNSTS  60
LFELSLSNPK PSPEPNSVHF HHLQNNHMNI IHSLYQNHLT NHYHQQQNQG LNSELSFLKP  120
IRGIPVYHQN PPTPTSPFPF TQQTFDNTTT AATLPLRSSA SYINNNNKTI SSTTMAFQSQ  180
QHHNHQAGIM RSRFLSRFPT KRTMRAPRMR WTSSLHARFI HAVELLGGHE RATPKSVLEL  240
MDMYRTVKTT DRAAGPASSG QSEVFDNGSS GDNTSEDLMP DTENSRKTEL SDQQDRQRIH  300
LPGNDYNGLW SNSSSRESWQ LHDKPGDYPG NIPSLEKKQH KDMEANCSSY DRVSAEVSSS  360
SITKTSPKNP NLEFTLGRSS E
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that regulates lateral organ polarity. Promotes abaxial cell fate during lateral organd formation. Functions with KAN1 in the specification of polarity of the ovule outer integument. {ECO:0000269|PubMed:11525739, ECO:0000269|PubMed:15286295, ECO:0000269|PubMed:16623911, ECO:0000269|PubMed:17307928}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009615774.10.0PREDICTED: probable transcription factor KAN2 isoform X3
RefseqXP_016459616.10.0PREDICTED: probable transcription factor KAN2 isoform X3
SwissprotQ9C6162e-77KAN2_ARATH; Probable transcription factor KAN2
TrEMBLA0A1S3Z5E60.0A0A1S3Z5E6_TOBAC; probable transcription factor KAN2 isoform X3
STRINGXP_009615772.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27382255
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.11e-77G2-like family protein
Publications ? help Back to Top
  1. Machida C,Nakagawa A,Kojima S,Takahashi H,Machida Y
    The complex of ASYMMETRIC LEAVES (AS) proteins plays a central role in antagonistic interactions of genes for leaf polarity specification in Arabidopsis.
    Wiley Interdiscip Rev Dev Biol, 2015 Nov-Dec. 4(6): p. 655-71
    [PMID:26108442]