PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01380g06003.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 266aa    MW: 30396.8 Da    PI: 8.6597
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01380g06003.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.51.4e-1921264128
                       NAM   4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                               G +F Ptd el+ +yLk+ + gk+l+ +  i+  +iy    Pw +    +++e+ wy  ++ +k +++ k+  r++ +g W+ + 
  Peinf101Scf01380g06003.1   2 GEQFLPTDGELI-KYLKRFLMGKPLPNHCPIRLGEIYCDkPPWVIF--GSSQENVWYVITPLKKVKKQHKKFCRKVGNGSWSGQT 83 
                               789*********.9**********9996669999887661667775..346789******************************* PP

                       NAM  88 kdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                               +  ++++++g++vg +k+Lv+   + ++++ +  +W+m ey++
  Peinf101Scf01380g06003.1  84 SGDPIKNREGTVVGFRKSLVYEsrTSKEQRKNGVNWLMREYSV 126
                               *********************94333555556789******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.7291149IPR003441NAC domain
SuperFamilySSF1019411.7E-222148IPR003441NAC domain
PfamPF023658.9E-132126IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MGEQFLPTDG ELIKYLKRFL MGKPLPNHCP IRLGEIYCDK PPWVIFGSSQ ENVWYVITPL  60
KKVKKQHKKF CRKVGNGSWS GQTSGDPIKN REGTVVGFRK SLVYESRTSK EQRKNGVNWL  120
MREYSVGDDY FKRKGIPKQD VVLCQIKKHV KEKTVKNAVA LEEKDVEGVI QAMLHGPKYC  180
STQTNNNELF EAANGMKDLV PEVYDHQTNS NNIDFWKEMI NGMEGEGINV PQDLVEEVRG  240
WIVPEHSETV ELKTQQTGAQ GYVLGY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019255290.12e-72PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A1J6IG495e-71A0A1J6IG49_NICAT; Nac domain-containing protein 78
STRINGXP_009787362.13e-70(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.13e-15NAC domain containing protein 2