PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01380g08064.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bHLH

Protein Properties

Length: 160aa MW: 18177 Da PI: 10.5434

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01380g08064.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.7	5.5e-05	21	55	6	32
HHHHHHHHHHHHHHHHHHHCTSCC.C......... CS HLH 6 nerErrRRdriNsafeeLrellPk.as.......k 32 + +E++RR +++ ++L +l+P+ + Peinf101Scf01380g08064.1 21 KTVEKNRRIQMKYLCSKLFSLIPPhHFkpskrrkE 55 679*********************66565444440 PP

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence Send to blast
MERSSKCNNI TSTTSEKPDR KTVEKNRRIQ MKYLCSKLFS LIPPHHFKPS KRRKEVSQGT 60 GHKTSSSKGV MTSTKSLKTP VVEVRELGST IEVILISGLE KNFTMQEIIN ILEEEGAQVV 120 TADFATLHDK VFYTVHAQVR ISRLGVDASR VYWRVQKLVN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009618665.1	5e-71	PREDICTED: transcription factor ORG3-like
Refseq	XP_016456924.1	5e-71	PREDICTED: transcription factor ORG3-like
TrEMBL	A0A1S3YXK0	1e-69	A0A1S3YXK0_TOBAC; transcription factor ORG3-like
STRING	XP_009618665.1	2e-70	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6083	14	23

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G20970.1	3e-20	bHLH family protein