PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01468g00030.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

FAR1

Protein Properties

Length: 160aa MW: 18705 Da PI: 9.4248

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01468g00030.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.9	3e-27	54	140	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 kfY +YA++ GFsvr+ + +ks+++++i+ ++fvCskeg+r++++ + ++r+r +tr Ck l v+k+++g+w+v +l++eH Peinf101Scf01468g00030.1 54 KFYLDYAHRNGFSVRRGRITKSRKDKSIIGQEFVCSKEGFRRKKNLE---SNRPRDVTRERCKVLLYVSKKEEGNWVVCRLVSEH 135 6***************************************98777...999**************************** PP FAR1 86 nHela 90 nHela Peinf101Scf01468g00030.1 136 NHELA 140 *97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.7E-24	54	140	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence Send to blast
MENSNLDEQN IKGVEVRLEE SDMDGPEQAP YVGVENSREP YIGMDFQSLD DSFKFYLDYA 60 HRNGFSVRRG RITKSRKDKS IIGQEFVCSK EGFRRKKNLE SNRPRDVTRE RCKVLLYVSK 120 KEEGNWVVCR LVSEHNHELA SPNSQKFLRS KRKNGLDSIR

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015167012.1	1e-77	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A3Q7EE03	2e-64	A0A3Q7EE03_SOLLC; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA645	8	60

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-24	FAR1-related sequence 5