PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01556g11011.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

ZF-HD

Protein Properties

Length: 88aa MW: 9593.78 Da PI: 8.6218

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01556g11011.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	104.8	5.6e-33	24	79	2	58
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 +++rY eC+kNhAa++Gg+avDGC+Efm+s ge+gt+aal CaACgCHRnFHRrev+ Peinf101Scf01556g11011.1 24 RNIRYVECQKNHAANIGGYAVDGCREFMAS-GEDGTSAALACAACGCHRNFHRREVD 79 579************************9.999******************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04770	1.1E-30	26	78	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMs	TIGR01566	1.3E-27	27	78	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDom	PD125774	3.0E-21	28	86	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	25.766	28	77	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 88 aa Download sequence Send to blast
MMKKRQVVVR KDVSRRNTSG SSTRNIRYVE CQKNHAANIG GYAVDGCREF MASGEDGTSA 60 ALACAACGCH RNFHRREVDG GEVVSECP

Functional Description ? help Back to Top
Source	Description
UniProt	Inhibits zinc finger homeodomain (ZHD) transcription factors, such as ZHD5, by interacting with them to prevent both their nuclear localization and their DNA-binding properties. Involved in integrating signals from multiple hormones by preventing the expression of genes involved in gibberellic acid (GA), auxin and brassinosteroid signaling and by promoting the expression of abscisic acid (ABA)-responsive genes. Regulates several development aspects, including photomorphogenesis, apical dominance, longevity, flower morphology and fertility, as well as root and stem elongation. Promotes the formation of ectopic shoot meristems on leaf margins. {ECO:0000269\|PubMed:16412086, ECO:0000269\|PubMed:21059647, ECO:0000269\|PubMed:21455630}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009800036.1	7e-53	PREDICTED: mini zinc finger protein 3-like
Refseq	XP_019244748.1	7e-53	PREDICTED: mini zinc finger protein 3-like
Swissprot	Q9CA51	4e-32	MIF1_ARATH; Mini zinc finger protein 1
TrEMBL	A0A1J6J579	2e-51	A0A1J6J579_NICAT; Mini zinc finger protein 3
TrEMBL	A0A1U7YDL2	2e-51	A0A1U7YDL2_NICSY; mini zinc finger protein 3-like
STRING	XP_009800036.1	3e-52	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1105	24	86

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74660.1	1e-30	mini zinc finger 1