PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01559g00012.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 325aa    MW: 36495.8 Da    PI: 5.3801
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01559g00012.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.82.6e-0871103132
                               TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT CS
           Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg.tWktIartmg 32 
                               +g+W++eEd +l+ +++++G+g +W + ++++ 
  Peinf101Scf01559g00012.1  71 KGPWSPEEDARLKAYIEEHGTGnNWIALPQKIE 103
                               79********************99988888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.6E-1062101IPR009057Homeodomain-like
PROSITE profilePS5129411.16566126IPR017930Myb domain
SuperFamilySSF466896.16E-668104IPR009057Homeodomain-like
PfamPF002491.8E-671102IPR001005SANT/Myb domain
CDDcd001675.68E-47397No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MNPRGEDFFG FQKHHITHSF YLYKQVFSSN IFQPTINHKF KKIPFGSKLV EVKEILKMGR  60
APCCDKASVK KGPWSPEEDA RLKAYIEEHG TGNNWIALPQ KIENSLLQNL SNSALERLQL  120
HMQLQSLQNP LSFYNNPALW PKLTPLQQKM IQTLQATGLS IENQSSLLAQ ISPSANQVDQ  180
LGQKVGINEF ANTMSTRFKV NNEVEKSTVN NGISSSDSPI AFSNQKDVLD TNIGQENTGE  240
IQGIQGFTQA EIDDLILINN KGLIADQFDC FKEMDGSSSR DNLAWWSNDF DTNTTSSNSW  300
GSSSNNIVQQ TEGMYQDYAL GYNLQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009608553.11e-97PREDICTED: transcription factor MYB36
RefseqXP_016458757.11e-97PREDICTED: transcription factor MYB36-like
TrEMBLA0A1S3Z3K43e-96A0A1S3Z3K4_TOBAC; transcription factor MYB36-like
STRINGXP_009608553.16e-97(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49690.17e-23myb domain protein 84