PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01605g08001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 235aa    MW: 26576.4 Da    PI: 8.6916
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01605g08001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.3e-19107158256
                       AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 
                               +y+GVr+++ +g+++AeIrdp     kr+r +lg++ t+e+Aa a+++a+ kl+g+
  Peinf101Scf01605g08001.1 107 RYRGVRRRP-WGKFAAEIRDP---TrKRARLWLGTYETPEDAALAYDRAAYKLRGA 158
                               69*******.**********8...3346**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.00E-31106167No hitNo description
PROSITE profilePS5103224.724107165IPR001471AP2/ERF domain
SMARTSM003804.5E-35107171IPR001471AP2/ERF domain
PfamPF008479.6E-14107157IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-31107166IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-23107166IPR016177DNA-binding domain
PRINTSPR003677.5E-13108119IPR001471AP2/ERF domain
PRINTSPR003677.5E-13147167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MQLGHISSEF DLTIITHSIE HFCEHSSFSE LSPLFNYNDS IFQTPSSNSS STGSCTNWDQ  60
ILKDNNIGDD TSTTPSPTSF SDQSENLFAE PTKSEERGVQ ASPNWQRYRG VRRRPWGKFA  120
AEIRDPTRKR ARLWLGTYET PEDAALAYDR AAYKLRGARA SLNFPHLISS NVSEINRVKP  180
KRRLKSIEHS SSQNTANIDT PSPKKRNVEF LNSLAKANWN SHISIMERIE LGTLA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A6e-28106165160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A7e-28106170468ATERF1
3gcc_A7e-28106170468ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1179185PKRRLKS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ2596050.0HQ259605.1 Petunia x hybrida ethylene-responsive-element-binding factor 11 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009607861.11e-56PREDICTED: ethylene-responsive transcription factor 1-like
TrEMBLE3VVS01e-108E3VVS0_PETHY; Ethylene-responsive-element-binding factor 11
STRINGXP_009607861.15e-56(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-37ethylene-responsive element binding factor 13