PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01609g02014.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Dof

Protein Properties

Length: 467aa MW: 51531.9 Da PI: 7.4212

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01609g02014.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.1	8.2e-38	133	193	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k ++cprC+s++tkfCyynny+++qPryfCk+C+ryWt+GG++r vPvG+grrknk+ss Peinf101Scf01609g02014.1 133 PDKLIPCPRCNSMETKFCYYNNYNVNQPRYFCKKCQRYWTAGGTMRKVPVGSGRRKNKSSS 193 78999*****************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	6.0E-30	130	190	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.0E-31	135	191	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.848	137	191	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	139	175	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence Send to blast
MSEIGDSEIK LFGKTIGMTH EKVLVNITST TTTTCVHHHD HPSSPISTTS NEYKSSNSPI 60 SFFSNGQIIS EGEFSQSKQE NELTGLTEDS FTEPETSSGI SDGTKIQDAD KETLSPKSIK 120 NEDQCEEKTL KKPDKLIPCP RCNSMETKFC YYNNYNVNQP RYFCKKCQRY WTAGGTMRKV 180 PVGSGRRKNK SSSTSNYHHL NVSDALQVAQ FEAVHGMHLP ALRANGTVLT FGSDKPLCDS 240 MVSALNLADK SQNSTANRFH GSEQRMPSSC GGKDIGNDQS NGPCSTSSIL QEQANNSGNF 300 QAFHPQLPYF QGQPWPYSGY PVSFYPAAPY WGCTVASPWN VPWLSSDQSI DHSSPTSPTL 360 GKHTRDGSML NQSQSGRGDT VQEREAERSV LTPKTLRIHD PNEAAKSSIW STLGIKNDKI 420 DSVHGARLFK AFNHKADHRN HESDSSLVLQ ANPAAMSRSL NFRESTQ

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence Send to blast

MSEIGDSEIK LFGKTIGMTH EKVLVNITST TTTTCVHHHD HPSSPISTTS NEYKSSNSPI  60
SFFSNGQIIS EGEFSQSKQE NELTGLTEDS FTEPETSSGI SDGTKIQDAD KETLSPKSIK  120
NEDQCEEKTL KKPDKLIPCP RCNSMETKFC YYNNYNVNQP RYFCKKCQRY WTAGGTMRKV  180
PVGSGRRKNK SSSTSNYHHL NVSDALQVAQ FEAVHGMHLP ALRANGTVLT FGSDKPLCDS  240
MVSALNLADK SQNSTANRFH GSEQRMPSSC GGKDIGNDQS NGPCSTSSIL QEQANNSGNF  300
QAFHPQLPYF QGQPWPYSGY PVSFYPAAPY WGCTVASPWN VPWLSSDQSI DHSSPTSPTL  360
GKHTRDGSML NQSQSGRGDT VQEREAERSV LTPKTLRIHD PNEAAKSSIW STLGIKNDKI  420
DSVHGARLFK AFNHKADHRN HESDSSLVLQ ANPAAMSRSL NFRESTQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006355111.1	0.0	PREDICTED: cyclic dof factor 1 isoform X1
TrEMBL	M1BKM3	0.0	M1BKM3_SOLTU; Uncharacterized protein
STRING	PGSC0003DMT400047370	0.0	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA532	24	122

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.2	3e-88	cycling DOF factor 2