PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01611g02006.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 112aa    MW: 12904.3 Da    PI: 4.8893
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01611g02006.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM31.94e-103157127
                       NAM  1 lppGfrFhPtdeelvveyLkkkvegkk 27
                              + pGfrF Ptdeel+++yLkkkveg +
  Peinf101Scf01611g02006.1 31 MFPGFRFCPTDEELISYYLKKKVEGVD 57
                              579********************9977 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.22E-92762IPR003441NAC domain
PROSITE profilePS5100510.77431112IPR003441NAC domain
PfamPF023654.0E-83397IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    Send to blast
MEDGHDVSAG FTNESSDEKN VEISIATAST MFPGFRFCPT DEELISYYLK KKVEGVDKFQ  60
IVAHSYSNLA VRHIQYDRED DDRNTIISLN KYMLSTRRNH SGYLTYFVGY DV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019250218.15e-19PREDICTED: NAC domain-containing protein 40-like
TrEMBLA0A1J6IT191e-17A0A1J6IT19_NICAT; Nac domain-containing protein 60
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA41542243
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27300.18e-11NTM1-like 8