PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01633g07018.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Trihelix

Protein Properties

Length: 338aa MW: 38174.2 Da PI: 4.9576

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01633g07018.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	69.5	6.6e-22	40	133	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsesss 77 rW++qe+l+Lie+++ +e++ r +k + +p+W ++s+++r+ g +r+p+qC+++w+n+ ++kkik++e++ + s+s Peinf101Scf01633g07018.1 40 RWSRQETLLLIEGKKITEDAHRGRKtcsifgsdKPEPKWNSISSYCRQYGANRGPTQCRKRWSNMISDFKKIKTWESQTNGSSES 124 8***********966665553322366666699*****************************************9888888 PP trihelix 78 tcpyfdqle 86 + + ++l+ Peinf101Scf01633g07018.1 125 YWTMRNDLK 133 999999886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	3.82E-5	38	106	IPR009057	Homeodomain-like
Pfam	PF13837	1.1E-12	39	129	No hit	No description
PROSITE profile	PS50090	7.364	40	105	IPR017877	Myb-like domain
Gene3D	G3DSA:1.10.10.60	7.5E-6	40	106	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence Send to blast
MTSGSTEMHE NTTSAADLVD GQQIPTECTD DKSKTPRHPR WSRQETLLLI EGKKITEDAH 60 RGRKTCSIFG SDKPEPKWNS ISSYCRQYGA NRGPTQCRKR WSNMISDFKK IKTWESQTNG 120 SSESYWTMRN DLKRENKLPS FFDREVYDVL DGKELTAEAN QLALVTITDD KVDYGMETVE 180 EEESDEDEEQ ENGEAEAISH TGRYIIEDDV LLSAMEEIGS NPLKEGVSKD KKAKSIPSPM 240 PISGKAQGDQ SGSDFWRSSI FQDRVKRRRQ SSDGCTDTSL ENKLLKTLEQ NTNMLHAQLD 300 AQINNRQLDS EQHKENSASL IAALHKVADA LARVADKM

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019240956.1	0.0	PREDICTED: trihelix transcription factor ASR3-like
TrEMBL	A0A1S4CN58	0.0	A0A1S4CN58_TOBAC; trihelix transcription factor ASR3-like
TrEMBL	A0A1U7VZR6	0.0	A0A1U7VZR6_NICSY; trihelix transcription factor GT-2-like
STRING	XP_009773262.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1786	24	60

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	9e-69	Trihelix family protein