PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01676g01010.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 120aa    MW: 13694.7 Da    PI: 8.7569
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01676g01010.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.71e-131297998
                              HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..E CS
                        B3  9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelv 93
                              d++k++  +lp k + +h   +++ + +tl++    +W++kl  +k   +  +++GW++Fv + gLkegD +vF+l   + ++ +++
  Peinf101Scf01676g01010.1 12 DNSKRRFRILPPKIL-QHL--PATAVSITLRN-GQIEWNMKL--NKFCAKRRFSGGWSKFVTDTGLKEGDGLVFELLkCNnENVKFK 92
                              455555556666666.663..45667799888.669******..777777789**********************554666888888 PP

                              EEEE- CS
                        B3 94 vkvfr 98
                              v++++
  Peinf101Scf01676g01010.1 93 VQILD 97
                              88887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010193.3E-5499IPR003340B3 DNA binding domain
PROSITE profilePS5086311.758499IPR003340B3 DNA binding domain
CDDcd100174.43E-131097No hitNo description
Gene3DG3DSA:2.40.330.109.4E-141197IPR015300DNA-binding pseudobarrel domain
PfamPF023621.0E-111297IPR003340B3 DNA binding domain
SuperFamilySSF1019365.3E-131297IPR015300DNA-binding pseudobarrel domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    Send to blast
MNIFQQNGHN YDNSKRRFRI LPPKILQHLP ATAVSITLRN GQIEWNMKLN KFCAKRRFSG  60
GWSKFVTDTG LKEGDGLVFE LLKCNNENVK FKVQILDGSF PEELLQELGE GTSDNPVDVL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006354559.11e-21PREDICTED: B3 domain-containing protein Os06g0112300-like isoform X2
RefseqXP_006359110.11e-21PREDICTED: B3 domain-containing protein Os06g0112300-like isoform X2
STRINGPGSC0003DMT4000045234e-21(Solanum tuberosum)
STRINGPGSC0003DMT4000540934e-21(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18192154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.17e-08B3 family protein