PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01678g01002.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 105aa    MW: 12278.8 Da    PI: 4.4768
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01678g01002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.72.3e-121562347
                              SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding  3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47
                               WT eEd+++ +a+++l +      W  Ia++++ ++t  q+k+++q +
  Peinf101Scf01678g01002.1 15 LWTREEDKIFENAIAELFKTgedqEWGQIASRIP-NKTIQQVKHHYQLL 62
                              5****************9999*************.***********975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.73E-101169IPR009057Homeodomain-like
SMARTSM007174.3E-71265IPR001005SANT/Myb domain
CDDcd001671.88E-81663No hitNo description
Gene3DG3DSA:1.10.10.608.5E-91663IPR009057Homeodomain-like
PfamPF002492.4E-101661IPR001005SANT/Myb domain
PROSITE profilePS500907.5611663IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    Send to blast
MQRTSTMSEA SPTLLWTREE DKIFENAIAE LFKTGEDQEW GQIASRIPNK TIQQVKHHYQ  60
LLVEDITNIE TDLIPLPDYI EEDQVESNVK KEQEKKKKST DKECV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2507322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-17MYB family protein