PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01724g02031.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 244aa    MW: 27492.4 Da    PI: 4.6956
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01724g02031.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.47.8e-3052110259
                               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                               +D + WrKYGqK++kgs++pr+YY+C+++ gC++kk+vers++d +++++tY+++Hnh+
  Peinf101Scf01724g02031.1  52 SDCWFWRKYGQKPIKGSPYPRGYYKCSTSkGCSAKKQVERSSTDASLFIVTYTSTHNHP 110
                               699***********************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-3044112IPR003657WRKY domain
SuperFamilySSF1182901.83E-2548112IPR003657WRKY domain
SMARTSM007746.1E-3451111IPR003657WRKY domain
PROSITE profilePS5081131.30752112IPR003657WRKY domain
PfamPF031068.2E-2553110IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MGGSRPLRSE TKTSRLLEPL VAPKKRKMAQ KVVITVQMEA NNIKQKNEGP PSDCWFWRKY  60
GQKPIKGSPY PRGYYKCSTS KGCSAKKQVE RSSTDASLFI VTYTSTHNHP GPNFPSSDSN  120
NEEPNEESPD SPVTQDQEPI MDQHVSLKDN DDPQSFHYCK SPFKSTSISQ DILVQQEENS  180
FTDNLGTISY DDLPLSYPQL MNFPKSDLSE ENDFYDELGE LQLPPSSTSF AGIFEETILV  240
DPSY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B6e-20521131780Disease resistance protein RRS1
5w3x_D6e-20521131780Disease resistance protein RRS1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754409e-49HG975440.1 Solanum pennellii chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009628910.11e-135PREDICTED: probable WRKY transcription factor 35 isoform X4
RefseqXP_016470170.11e-135PREDICTED: probable WRKY transcription factor 35 isoform X2
TrEMBLA0A1S4A0Q01e-133A0A1S4A0Q0_TOBAC; probable WRKY transcription factor 35 isoform X2
STRINGXP_009628909.11e-131(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112812025
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.12e-34WRKY DNA-binding protein 35