PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01740g04020.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

FAR1

Protein Properties

Length: 214aa MW: 24914.9 Da PI: 9.3239

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01740g04020.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	38.2	4.7e-12	53	133	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 Yn+YA++ rk +++++ rn+e t+ f Cs egk+ ++ ++++ +r e r+gC a+++ k + +g ev ++ eHnH Peinf101Scf01740g04020.1 53 YNSYARS----KRKGAKTYN-RNQELTRCLFLCSSEGKSPLYSNY-QERKCQRLEYRCGCLARIRFKIS-NGMLEVFEFCDEHNH 130 7777774....355555554.7888*************99999.89999************99.************* PP FAR1 88 ela 90 ++ Peinf101Scf01740g04020.1 131 PMI 133 985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.8E-9	53	133	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence Send to blast
MEDSLADNDD FDNEDHNDGQ RSPTVQTVSD INNDFTLKIG MKFSSENESY ETYNSYARSK 60 RKGAKTYNRN QELTRCLFLC SSEGKSPLYS NYQERKCQRL EYRCGCLARI RFKISNGMLE 120 VFEFCDEHNH PMIEKNLRHF IQSGRKLMDS TKGVNDQVLD PVKKKGKGNG YGRLKPRTEQ 180 RKKRVPHKTL KARATEQQQQ QSMGLSFEVQ SLYN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	162	183	KKKGKGNGYGRLKPRTEQRKKR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019266793.1	5e-69	PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1-like
TrEMBL	A0A1S3ZUA7	1e-64	A0A1S3ZUA7_TOBAC; Uncharacterized protein
TrEMBL	A0A314L6H7	1e-64	A0A314L6H7_NICAT; Protein far1-related sequence 5 (Fragment)
STRING	XP_009771804.1	8e-65	(Nicotiana sylvestris)
STRING	XP_009628526.1	2e-64	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1726	9	31