PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01853g07028.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 139aa    MW: 15323 Da    PI: 4.0647
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01853g07028.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.84.3e-071444130
                              TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIart 30
                              rg+W+++Ed  l++ v++ G+g +W + +++
  Peinf101Scf01853g07028.1 14 RGPWSPDEDNTLKNFVEKNGTGgNWIALPQK 44
                              89********************999777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.4E-9544IPR009057Homeodomain-like
PROSITE profilePS500906.934955IPR017877Myb-like domain
SuperFamilySSF466892.11E-5945IPR009057Homeodomain-like
PfamPF002497.1E-61443IPR001005SANT/Myb domain
CDDcd001670.002911640No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MGRAPCCDKT KVKRGPWSPD EDNTLKNFVE KNGTGGNWIA LPQKAEMLNV ESSCQFPLPG  60
LMEIQENGAI TTLQEDGNYL MDFSSGISST YYDILNGFDF QEKAITADPN CSSSSCSTLV  120
QQQGYISDID QYPFKGVEN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754513e-38HG975451.1 Solanum pennellii chromosome ch12, complete genome.
GenBankHG9755243e-38HG975524.1 Solanum lycopersicum chromosome ch12, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009620040.11e-25PREDICTED: transcription factor RAX2-like
RefseqXP_016474887.11e-25PREDICTED: transcription factor RAX2-like
RefseqXP_016541166.11e-25PREDICTED: transcription factor MYB36-like
TrEMBLA0A1S4ADY43e-24A0A1S4ADY4_TOBAC; transcription factor RAX2-like
TrEMBLA0A1U8E4223e-24A0A1U8E422_CAPAN; transcription factor MYB36-like
TrEMBLA0A2G2X3R52e-24A0A2G2X3R5_CAPBA; Myb-related protein Myb4
TrEMBLA0A2G2YUZ82e-24A0A2G2YUZ8_CAPAN; Myb-related protein Myb4
TrEMBLA0A2G3BNU13e-24A0A2G3BNU1_CAPCH; Myb-related protein Myb4
STRINGXP_009620040.15e-25(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2547422
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.12e-23MYB family protein