PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01889g04010.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 447aa    MW: 52269.6 Da    PI: 7.0193
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01889g04010.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM110.32.2e-34151461128
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyW 83 
                               lppGfrF P+de l  +yL +kv+g+++    +i e+d+y+v+P +Lp  ++ ee+ +yfF+kr++ky++g+++ r tk  +gyW
  Peinf101Scf01889g04010.1  15 LPPGFRFMPSDEVLCEYYLFRKVNGESIMP-GIILEADVYQVNPFQLP-GIDREEQYTYFFTKRERKYPNGNKSARGTKdgKGYW 97 
                               79*************************877.89***************.777788899******************7776799** PP

                       NAM  84 katgkdkevlsk...kgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                               k t k+++v +    ++el g k+tLv+y k    + +kt+W+mhe++l
  Peinf101Scf01889g04010.1  98 KMTSKNNKVPKDcskEEELLGKKNTLVYYlKSPGLREVKTNWIMHEFEL 146
                               *********9877667788**********545667889*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-4014174IPR003441NAC domain
PROSITE profilePS5100543.38115174IPR003441NAC domain
PfamPF023653.4E-2016146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
MSKDKEVAAE WKKLLPPGFR FMPSDEVLCE YYLFRKVNGE SIMPGIILEA DVYQVNPFQL  60
PGIDREEQYT YFFTKRERKY PNGNKSARGT KDGKGYWKMT SKNNKVPKDC SKEEELLGKK  120
NTLVYYLKSP GLREVKTNWI MHEFELADRL LASTSQHPKK KQFNDMVLCR IYHRGKGEST  180
DDEEQKDNTN NREPPLLLLP PPPPPQQQHR QQQQQQQLRP KLQSPSKRKF EANESTTSHP  240
HVANKINFYG THHDKKKDTI GSRLIHEHKQ VNHINNQEPL PSQPPQHQQL QQQLLHSKLP  300
SPSEQRFETN ETITSHPHIA KKLKLYAGHD QQANNGFGQE NPITYHIPLE MVQHIHSTRA  360
DQNVSLSTEE ENTRGILHVK TEENSSNDYP QFEMSHNIIR DECIPLVSEN YWALPTEEWE  420
EAVLNMPFEE LNYYMDFYNI DHPQTLS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-3111741168Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016576349.11e-63PREDICTED: NAC domain-containing protein 83-like
TrEMBLA0A2G3C9699e-65A0A2G3C969_CAPCH; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1918223
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.18e-34NAC family protein