PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01889g13056.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Dof

Protein Properties

Length: 143aa MW: 16180.9 Da PI: 7.705

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01889g13056.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.2	1.8e-38	17	75	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++++lkcprC+s ntkfCyynny+lsqPr+fCk+C+ryWtkGG+lr +PvGgg+rk+ k Peinf101Scf01889g13056.1 17 EQEILKCPRCESLNTKFCYYNNYNLSQPRHFCKSCKRYWTKGGTLRKIPVGGGSRKHTK 75 57899***************************************************876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	6.0E-27	8	75	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	8.5E-34	19	74	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.286	21	75	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	23	59	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence Send to blast
MQEPSIYTQM NQPQFPEQEI LKCPRCESLN TKFCYYNNYN LSQPRHFCKS CKRYWTKGGT 60 LRKIPVGGGS RKHTKPMNPN GSNLELSEFA GRESSSSGLV SGQDCIPQSG NKYDTYEYLG 120 VQNDGDSSCW NGNDGWPDLA FDK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009593393.1	4e-48	PREDICTED: dof zinc finger protein DOF3.1-like
TrEMBL	A0A1S3XE17	2e-46	A0A1S3XE17_TOBAC; dof zinc finger protein DOF3.1-like
STRING	XP_009593393.1	1e-47	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	2e-37	DOF zinc finger protein 1