PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01913g00005.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bHLH

Protein Properties

Length: 122aa MW: 13412.9 Da PI: 10.6319

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01913g00005.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15.3	3.7e-05	10	29	37	55
-.STCHHHHHHHHHHHHHHH CS HLH 37 K.lsKaeiLekAveYIksLq 55 K +Ka++L +++eY+k+Lq Peinf101Scf01913g00005.1 10 KsTNKASMLDEVIEYMKQLQ 29 449****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	1.82E-4	10	33	No hit	No description
SuperFamily	SSF47459	1.02E-5	10	45	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.0E-6	11	37	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 122 aa Download sequence Send to blast
MWSYCSKAIK STNKASMLDE VIEYMKQLQA QVQAMSNTII YPMMLPVAVQ QQLQMSMMAP 60 AMRMRMAALI RPSAAARPAV LHPTASFMPI SPRGRVNDAS TAAVVPNSLS TFQSQVLLTF 120 TS

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012083633.1	4e-19	transcription factor UNE10
Refseq	XP_015582839.1	4e-19	transcription factor UNE10
TrEMBL	B9RD58	8e-18	B9RD58_RICCO; DNA binding protein, putative
STRING	XP_002511647.1	1e-18	(Ricinus communis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA15785	2	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36930.1	4e-09	bHLH family protein