PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01933g07027.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Trihelix
Protein Properties Length: 334aa    MW: 37267.3 Da    PI: 7.9476
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01933g07027.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix68.99.7e-22126222185
                  trihelix   1 rWtkqevlaLiearremeerlr.rgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.ts 73 
                               +Wt++ v++Li+++  ++++ + +g+          +kk++W+ vs+ m + g+++sp+qC++k+++lnkrykk++++ +++ ++
  Peinf101Scf01933g07027.1 126 KWTDNVVRLLIQVVACVGDDGSlEGSeglkrksgciQKKGKWKTVSRIMLSNGCHVSPQQCEDKFNDLNKRYKKLNDILGRGtSC 210
                               7**************777777743334566667889**********************************************558 PP

                  trihelix  74 essstcpyfdql 85 
                                ++++ ++ d++
  Peinf101Scf01933g07027.1 211 AVVENPVLMDSM 222
                               899888888877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138376.4E-18124214No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MSSSGMGGGF LSGYNGGFLG MNMLQQPQSN SNNAAHGHPT SHNNVQSSMN TRLGLENDKP  60
IGLMDVKDCM AFGKDKAAGP SNAVNNCNNP INNTSDEDEP SFTEDGNCDN GAVAQGKKGS  120
PWQRMKWTDN VVRLLIQVVA CVGDDGSLEG SEGLKRKSGC IQKKGKWKTV SRIMLSNGCH  180
VSPQQCEDKF NDLNKRYKKL NDILGRGTSC AVVENPVLMD SMPQLSAKAK ETWEQKIWIK  240
KRMLQLEEEK VGIQAEALEL EKRQFKWQRF CRKKDRELEM ERLENEKLIL ENEHMALQLK  300
HKELELDSKK PNISFNSAPL SIDRPLGRDQ IDAA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019253708.11e-140PREDICTED: uncharacterized protein LOC109232405
TrEMBLA0A1J6IUX11e-138A0A1J6IUX1_NICAT; Uncharacterized protein
STRINGXP_009628855.11e-137(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA129131720
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.14e-49sequence-specific DNA binding transcription factors