PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01969g06011.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Dof
Protein Properties Length: 573aa    MW: 64460.1 Da    PI: 7.4337
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01969g06011.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.11.9e-38219278261
                    zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                               ++k+l+cprC+s++tkfCy+nny++sqPr+fCk+C+ryWt+GG++rnvPvG+grr++k++
  Peinf101Scf01969g06011.1 219 PDKILPCPRCNSMETKFCYFNNYNVSQPRHFCKNCQRYWTAGGTMRNVPVGAGRRRSKNT 278
                               7899****************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF578503.74E-2048105No hitNo description
Gene3DG3DSA:3.30.40.102.5E-185099IPR013083Zinc finger, RING/FYVE/PHD-type
PfamPF136399.4E-145496IPR001841Zinc finger, RING-type
CDDcd001627.05E-105499No hitNo description
PROSITE profilePS5008912.125596IPR001841Zinc finger, RING-type
SMARTSM001843.4E-75595IPR001841Zinc finger, RING-type
ProDomPD0074783.0E-29216276IPR003851Zinc finger, Dof-type
PfamPF027012.1E-31221277IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.705223277IPR003851Zinc finger, Dof-type
PROSITE patternPS013610225261IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 573 aa     Download sequence    Send to blast
MAMRRNISDT RRSWRSSPFS RWSPAIDQYN VPLLSTLAPI EALRTVEIVE ENTECAICLL  60
EFQVGEKAKE MPCKHRYHSN CINKWLGIRR TCPICRYKLP VKMEWRRKVT IRADSTNNYS  120
TIRTDPAIKL FGHTIQFPDF HSYSAGEHEQ EHKDQRDDCK NESEPLTAEE LEDQNHILEK  180
SDIIKESPSY NDCSTAETSK NEEGQGETGD SPEKILKKPD KILPCPRCNS METKFCYFNN  240
YNVSQPRHFC KNCQRYWTAG GTMRNVPVGA GRRRSKNTVF HYRHISVTET VPNARTDFPN  300
GTKPSLKLNG SILTFDTDKP LLESMASVLN VADKTMQNCS DNGFHKYEEL RLPVAYEAGD  360
NGDDHSEGSS VTAVSSKDCG NKDGNCNSFS PNLPCFSGAP WPYPWSSVHW SNAVPPPGYC  420
LPGFPMPFYP ATTYWGCTIP GSWNVPWMSP HTASQNQKPP NSGPNSSTLG KHSRDEDVLK  480
STGSEKELRK ENNPEKCLWF PKTLRIDDPG DAAKSSIWAT LGIKPDVVDS ARAGLLKPFQ  540
PKSDERNHVS ENSTVLQANP AAMSRSLNFS ESS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009792864.10.0PREDICTED: cyclic dof factor 3-like
TrEMBLA0A1U7Y0V00.0A0A1U7Y0V0_NICSY; cyclic dof factor 3-like
STRINGXP_009792864.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53224122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39660.26e-97cycling DOF factor 2