PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01997g00005.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 333aa    MW: 36939.6 Da    PI: 6.6403
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01997g00005.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.22.6e-31158216259
                               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                               +D ++WrKYGqK++kgs++pr+YYrC+++ gC ++k+ver+++dp++++itY+ eHnh+
  Peinf101Scf01997g00005.1 158 SDMWSWRKYGQKPIKGSPYPRGYYRCSTSkGCLARKQVERNRSDPSMFIITYTAEHNHP 216
                               79************************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.0E-31148218IPR003657WRKY domain
PROSITE profilePS5081134.75152218IPR003657WRKY domain
SuperFamilySSF1182901.07E-26155218IPR003657WRKY domain
SMARTSM007742.7E-37157217IPR003657WRKY domain
PfamPF031063.4E-26159216IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010150Biological Processleaf senescence
GO:0010200Biological Processresponse to chitin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MEDDWDLHAV VRGCAASSTT VTTTTTTSTT SCCSSFQPRQ DDNFLSFQDL FLPRFDNPTS  60
SFEELHNLYK PFFPKSQPQM LPLSPQNIPI SPLSVLGGLQ DLSPQQNLKQ QHQNHFHING  120
STTSVSHGTS HNTQSPRPKR RKNQLKKVCQ VPAEGLSSDM WSWRKYGQKP IKGSPYPRGY  180
YRCSTSKGCL ARKQVERNRS DPSMFIITYT AEHNHPMPTH RNSLAGSTRH KPVTSDSNNK  240
PTTSSPVSSP ACHSPATEKQ ESSSREEKDD MSEDDEFGSS NNNNMEPADD EFFEGLEELA  300
AQATGDCFSD NFPVSMQLPW LTNNATTTAA GGG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B3e-23142219280Disease resistance protein RRS1
5w3x_D3e-23142219280Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00422DAPTransfer from AT4G01250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015061786.11e-173WRKY transcription factor 22-like
TrEMBLM0ZGA41e-167M0ZGA4_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000002151e-167(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA25912457
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-76WRKY family protein