PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02008g00028.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 209aa    MW: 23948.7 Da    PI: 9.6734
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02008g00028.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.61.9e-121262051494
                               T-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
                        B3  14 grlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                               + l lp +  +++  +  k +   + l+ ++ r W   +  r +sg+ vlt GWk+F  a +Lk gD ++F+l+++ +++ ++v
  Peinf101Scf02008g00028.1 126 DFLQLPESW-RKYlkKRAKMGRWIIYLRGPDKRPWATFY--RSRSGKEVLTHGWKNFTAAYDLKPGDKCLFQLENQlECT-FNV 205
                               556666665.356564445566789**************..999999*************************98764433.455 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086311.068113209IPR003340B3 DNA binding domain
SMARTSM010190.0046118209IPR003340B3 DNA binding domain
CDDcd100171.08E-11122207No hitNo description
PfamPF023621.4E-9125205IPR003340B3 DNA binding domain
SuperFamilySSF1019363.53E-13126206IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.106.6E-13126207IPR015300DNA-binding pseudobarrel domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MWVLPHEAKK SSLIKKELVE TATEVDCPAK RRRLVKKEEL VETAIEADCP PKKIRLVKKE  60
PGEAATEAYC LARALSALIS FDMTVPDSGK EPRNGKDKVI KSEPADSGET PSLISYSFLQ  120
EVDGRDFLQL PESWRKYLKK RAKMGRWIIY LRGPDKRPWA TFYRSRSGKE VLTHGWKNFT  180
AAYDLKPGDK CLFQLENQLE CTFNVQVQK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12933KRRRL
2137143LKKRAKM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009616984.16e-65PREDICTED: B3 domain-containing protein Os01g0905400-like isoform X9
RefseqXP_009616985.16e-65PREDICTED: B3 domain-containing protein Os01g0905400-like isoform X9
RefseqXP_009616988.15e-65PREDICTED: uncharacterized protein LOC104109401 isoform X15
TrEMBLA0A1J6IKJ02e-56A0A1J6IKJ0_NICAT; B3 domain-containing protein
STRINGXP_009616981.15e-64(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22102352