PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf02135g00018.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

MYB_related

Protein Properties

Length: 208aa MW: 23571.2 Da PI: 5.0945

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf02135g00018.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.3	3.1e-07	14	41	1	27
TSSS-HHHHHHHHHHHHHTTTT.-HHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktI 27 rg W+++Ede+l+++ ++G+g +W t Peinf101Scf02135g00018.1 14 RGQWSPDEDEILKNYLLKHGTGgNWITL 41 89********************999765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	7.7E-9	5	39	IPR009057	Homeodomain-like
SuperFamily	SSF46689	5.38E-5	8	42	IPR009057	Homeodomain-like
PROSITE profile	PS50090	6.249	9	38	IPR017877	Myb-like domain
CDD	cd00167	0.00956	17	38	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence Send to blast
MGRTPCCDKN KVKRGQWSPD EDEILKNYLL KHGTGGNWIT LPLRAEEEKQ APYSLMQFPF 60 PYLDSAELSI NTNNIDQKHF PIPSFTQENS KNSGTSSVSF DETNDFAWFE KGANDSFEGF 120 PLGFSTDEIM DAYVFGILIY SFITQYSEIA NAPTSNLLLI LHASPRIQRD DGREARFPRD 180 RIHQIFTMSS GGSVNCRRHQ KEGSGQES

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA15590	5	7

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23000.1	1e-17	myb domain protein 37