PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02160g03024.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 91aa    MW: 10159.4 Da    PI: 5.5559
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02160g03024.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.97.7e-0814551454
                              HHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS
                       HLH 14 driNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54
                              d+iN+   +L++llP++s+++++  +  + iLe++++YI++L
  Peinf101Scf02160g03024.1 14 DEINDLVLNLQSLLPNSSSGQCTSrVAASKILEETCNYIRML 55
                              78**************878888888***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.347155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-81375IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-71370IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.0E-51455IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    Send to blast
MSSRRRSNSR FSQDEINDLV LNLQSLLPNS SSGQCTSRVA ASKILEETCN YIRMLHSEVD  60
DLSERLSQIL ASVDTNTHVG LVDTLISLLQ H
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009773320.18e-37PREDICTED: transcription factor ILI5-like
TrEMBLA0A1U7WGE92e-35A0A1U7WGE9_NICSY; transcription factor ILI5-like
STRINGXP_009773320.13e-36(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA35324161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.17e-16bHLH family protein