PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf02190g00005.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

G2-like

Protein Properties

Length: 220aa MW: 24966.2 Da PI: 7.8529

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf02190g00005.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	44.8	2.8e-14	3	33	25	55
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 e+AtPk++l+lm++kgL l+++kSHLQkYRl Peinf101Scf02190g00005.1 3 ERATPKSVLRLMGLKGLNLYQLKSHLQKYRL 33 79****************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	4.9E-13	2	34	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	4.7E-9	3	34	IPR006447	Myb domain, plants
SuperFamily	SSF46689	3.23E-5	3	36	IPR009057	Homeodomain-like
Pfam	PF14379	2.1E-20	79	124	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence Send to blast
MGERATPKSV LRLMGLKGLN LYQLKSHLQK YRLGQQAKKQ NAADQNKENS GDSSGQFSLH 60 LSGPSTSSLN MNYMQGGVPI SEAVMSQIEV QKRLQEQLEV QQKLQMRIEA QDKYLQAMLE 120 KAQKNIPVSM NSPSALEATR AQHFNLPLSN ITDHMHGDNM DDNIMGQRIY DNTNEELPKS 180 DYFKEEDQKR YMNLKLKEVS ITFDLNSRSS YDFFGANAAV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019247845.1	1e-111	PREDICTED: myb family transcription factor PHL11 isoform X1
Refseq	XP_019247847.1	1e-111	PREDICTED: myb family transcription factor PHL11 isoform X3
TrEMBL	A0A1J6ID59	1e-109	A0A1J6ID59_NICAT; Myb family transcription factor phl11
STRING	XP_009769428.1	1e-101	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4416	21	39

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	1e-24	G2-like family protein